latest--kimmdy-yaml-schema

shared
Type object
Schema URL https://catalog.lintel.tools/schemas/schemastore/kimmdy-config-file/_shared/latest--kimmdy-yaml-schema.json
Parent schema kimmdy-config-file
Type: object

Settings for TT-Dimerization

Properties

k1 number

Distance scaling [1/nm]

Default: 2.017017017017017
k2 number

Angle scaling [1/deg]

Default: 0.03003003003003003
d0 number

Optimal distance [nm]

Default: 0.157177
n0 number

Optimal angle [deg]

Default: 16.743651884789273
kmc string

KMC algorithm for this reaction.

Default: "extrande_mod"
Values: "rfkmc" "frm" "extrande" "extrande_mod"
reslist string

Residues considered for reactions (dot-separated)

Default: "all"